BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D07LP1|AL425686
(757 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1498 0.0
>3x_Contig1800
Length = 38778
Score = 1498 bits (755), Expect = 0.0
Identities = 756/757 (99%)
Strand = Plus / Plus
Query: 1 gatccccgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10024 gatccccgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtat 10083
Query: 61 ctggtatttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10084 ctggtatttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgca 10143
Query: 121 ttgtgactactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10144 ttgtgactactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggaca 10203
Query: 181 gacatggtggggtgccttttcggtccataagtgtaactagctagctacaagtatgttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10204 gacatggtggggtgccttttcggtccataagtgtaactagctagctacaagtatgttctg 10263
Query: 241 tgcaaagatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10264 tgcaaagatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctg 10323
Query: 301 acctagcttaacattgcatagcgcatacccacttggatggatgcaggagtgttacaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10324 acctagcttaacattgcatagcgcatacccacttggatggatgcaggagtgttacaaatc 10383
Query: 361 ggcgaacagttctccttgtttgtttttggtcatagtcacgtccggctacacacaagatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10384 ggcgaacagttctccttgtttgtttttggtcatagtcacgtccggctacacacaagatat 10443
Query: 421 ggcacagtatgtgtagatgcgagcsaagatacggctggaaaacaggtgggttttgaagga 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10444 ggcacagtatgtgtagatgcgagcgaagatacggctggaaaacaggtgggttttgaagga 10503
Query: 481 tagacagaaggcaaaagggtgggcaaaaagtcgggcactcaggcaagtattggcatgatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10504 tagacagaaggcaaaagggtgggcaaaaagtcgggcactcaggcaagtattggcatgatc 10563
Query: 541 aaaccagattaagttctaggccaagaacatatttcggcccactgactcccgccaaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10564 aaaccagattaagttctaggccaagaacatatttcggcccactgactcccgccaaaaaaa 10623
Query: 601 aagaaaaaaacctaatttgacagtctcggaattttatctatctgttcctttcctttggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10624 aagaaaaaaacctaatttgacagtctcggaattttatctatctgttcctttcctttggtt 10683
Query: 661 actagtatcgtcatttaattttttttggaattggcaagttacctgcgtggctctataccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10684 actagtatcgtcatttaattttttttggaattggcaagttacctgcgtggctctataccg 10743
Query: 721 aatgaaccccgaccctggccgttcggtgcaccgagcg 757
|||||||||||||||||||||||||||||||||||||
Sbjct: 10744 aatgaaccccgaccctggccgttcggtgcaccgagcg 10780
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5368
Number of Sequences: 1807
Number of extensions: 5368
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 1
length of query: 757
length of database: 10,358,551
effective HSP length: 16
effective length of query: 741
effective length of database: 10,329,639
effective search space: 7654262499
effective search space used: 7654262499
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)